PhysiCell Configuration Builder runs on your own machine — the client starts it, so there is no endpoint to ping. 1 158 installs a week from pypi. Last commit 28 Oct 2026.
MCP server for building, inspecting, and exporting PhysiCell and PhysiBoSS configuration files
We read the source, 5 d ago · rules 995398eba69f
What this server is able to do. For an MCP server this is often the job itself — a terminal server runs commands because that is what it is for. Listed so you know what you are plugging in, not as an accusation.
process = subprocess.Popen(
Is this your server and something here is wrong? Tell us — corrections are free and do not require a plan.
We found places where it runs commands, builds paths or queries from values it is given. None of that is a flaw by itself — it becomes one when the code changes, and code changes quietly between releases. We re-read it on every one.
This server runs on your own machine — install it with the package manager and the client starts it for you. Package name taken from the official registry entry.
claude mcp add PhysiCell -- uvx mcp-biomodelling-servers
{
"mcpServers": {
"PhysiCell": {
"command": "uvx",
"args": [
"mcp-biomodelling-servers"
]
}
}
}
[mcp_servers.PhysiCell]
command = "uvx"
args = ["mcp-biomodelling-servers"]
{
"mcpServers": {
"PhysiCell": {
"command": "uvx",
"args": [
"mcp-biomodelling-servers"
]
}
}
}
{
"servers": {
"PhysiCell": {
"type": "stdio",
"command": "uvx",
"args": [
"mcp-biomodelling-servers"
]
}
}
}
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