| Generate lightweight section/subsection transitions (NO NEW FACTS) to prevent “island” subsections; outputs a transition map that merging/writing can weave in.
npx skills add https://github.com/WILLOSCAR/research-units-pipeline-skills --skill transition-weaver
Purpose: produce a small, low-risk “transition map” so adjacent subsections do not read like islands.
This skill is intentionally low-risk and deterministic:
outline/transitions.md from adjacent subsection titles + brief bridge handlesTransitions should answer:
outline/transitions.md is not planning notes: section-merger injects it into output/DRAFT.md.
So each transition line must be safe to read as paper prose.
Format contract (for merge insertion):
- 3.1 -> 3.2: <text> are inserted by default (within-chapter H3 -> next H3).<text> as one sentence without list formatting.Notes:
-> (not a unicode arrow) to avoid invisible/control-character encoding issues.section-merger accepts both -> and → for backward compatibility, but -> is the preferred contract.Hard rules:
Rewrite triggers (if you see these, rewrite):
You are the coherence linker for a survey.
Your job is to write short, content-bearing transitions between adjacent subsections:
- restate what was established (one clause)
- name the remaining tension/gap (one clause)
- justify why the next subsection is the right lens (one clause)
Style:
- argument bridge, not navigation
- no “Now we discuss / Next we move / In this section…”
- no semicolon planning notes
Constraints:
- NO NEW FACTS
- NO citations
- only reuse handles that already exist (titles, RQs, bridge_terms)
Style targets (paper-like, still NO NEW FACTS):
CRITICAL: Transitions must be real content sentences, NOT construction notes.
Also avoid (reads like axis/planning notes once merged):
A/B/C, planning/memory); rewrite using natural prose (and/or).outline/outline.yml (ordering + titles)outline/subsection_briefs.jsonl (expects rq and optional bridge_terms/contrast_hook)outline/transitions.md (used by section-merger; keep paper voice)1) Read outline/outline.yml to determine adjacency (which H3 follows which).
2) Read outline/subsection_briefs.jsonl to extract each subsection’s rq and any bridge handles (bridge_terms, contrast_hook).
3) For each boundary, write 1–2 transition sentences:
TODO, …, <!-- SCAFFOLD -->)4) Write outline/transitions.md.
Mission: write short, content-bearing transitions without narration.
Do:
Avoid:
Mission: delete anything that reads like construction notes.
Do:
Avoid:
You usually do not run this manually; it exists so a pipeline runner can deterministically generate and validate the artifact.
uv run python .codex/skills/transition-weaver/scripts/run.py --workspace <workspace>--workspace <dir>: workspace root--unit-id <U###>: unit id (optional; for logs)--inputs <semicolon-separated>: override inputs (rare; prefer defaults)--outputs <semicolon-separated>: override outputs (rare; default validates outline/transitions.md)--checkpoint <C#>: checkpoint id (optional; for logs)outline/transitions.md:uv run python .codex/skills/transition-weaver/scripts/run.py --workspace <workspace>Fix:
bridge_terms / contrast_hook).By default, section-merger does not insert generated transitions. Create
outline/transitions.insert_h3.ok for within-chapter H3 transitions or
outline/transitions.insert_h2.ok for between-H2 transitions, then run the
post-merge voice gate.
Guide users through a structured workflow for co-authoring documentation. Use when user wants to write documentation, proposals, technical specs, decision docs, or similar structured content. This workflow helps users efficiently transfer context, refine content through iteration, and verify the doc works for readers. Trigger when user mentions writing docs, creating proposals, drafting specs, or similar documentation tasks.
Automatically creates user-facing changelogs from git commits by analyzing commit history, categorizing changes, and transforming technical commits into clear, customer-friendly release notes. Turns hours of manual changelog writing into minutes of automated generation.
Use when implementing any feature or bugfix, before writing implementation code
Use when you have a spec or requirements for a multi-step task, before touching code
Use when creating new skills, editing existing skills, or verifying skills work before deployment
Use when writing or improving README files. Not all READMEs are the same — provides templates and guidance matched to your audience and project type.
| Remove signs of AI-generated writing from text. Use when editing or reviewing text to make it sound more natural and human-written. Based on Wikipedia's inflated symbolism, promotional language, superficial -ing analyses, vague attributions, em dash overuse, rule of three, AI vocabulary words, negative parallelisms, and excessive conjunctive phrases.
Official Opentrons Protocol API for OT-2 and Flex robots. Use when writing protocols specifically for Opentrons hardware with full access to Protocol API v2 features. Best for production Opentrons protocols, official API compatibility. For multi-vendor automation or broader equipment control use pylabrobot.
Take willoscar/transition-weaver from the repository into ~/.claude/skills for personal
use, or into .claude/skills inside a project.
The agent identifies a skill by the name field in its header. Two skills with the
same name cannot sit side by side — one of them will be ignored.