mcpbeat Sign in

Deepxiv Agent Skill

Search and progressively read open-access academic papers through DeepXiv. Use when the user wants layered paper access, section-level reading, trending papers, or DeepXiv-backed literature retrieval.

1k tokens
context cost
the whole folder, loaded on every use
1
files
instructions only
0
copies elsewhere
how many repositories repackaged it
14221
stars on the repo
on the repository, not the skill itself

Install

one command, takes just this skill from the repository
npx skills add https://github.com/wanshuiyin/Auto-claude-code-research-in-sleep --skill deepxiv

The instruction itself

12 sections, as written by the author

DeepXiv Paper Search & Progressive Reading

Search topic or paper ID: $ARGUMENTS

Role & Positioning

DeepXiv is the progressive-reading literature source:

| Skill | Source | Best for |

|-------|--------|----------|

| /arxiv | arXiv API | Batch search, PDF download, metadata |

| /deepxiv | DeepXiv SDK | Progressive section-level reading |

| /semantic-scholar | S2 API | Published venue metadata, citation counts |

| /alphaxiv | alphaxiv.org | Instant LLM-optimized summary of one paper, with LaTeX source fallback |

Use DeepXiv when you want to inspect papers incrementally instead of loading the full text immediately.

Constants

  • DEEPXIV_FETCHER — canonical name deepxiv_fetch.py, resolved per

shared-references/integration-contract.md §2

(Codex-side chain: $ARIS_REPO/tools/tools/~/.codex/skills/deepxiv/).

Policy D1 — if unresolved (canonical chain exhausted), fall back to raw deepxiv CLI.

  • MAX_RESULTS = 10 — Default number of search results.

> Overrides (append to arguments):

> - /deepxiv "agent memory" - max: 5

> - /deepxiv "2409.05591" - brief

> - /deepxiv "2409.05591" - head

> - /deepxiv "2409.05591" - section: Introduction

> - /deepxiv "trending" - days: 14 - max: 10

> - /deepxiv "karpathy" - web

> - /deepxiv "258001" - sc

Setup

DeepXiv is optional:

pip install deepxiv-sdk

On first use, deepxiv auto-registers a free token and stores it in ~/.env.

Workflow

Step 1: Parse Arguments

Parse $ARGUMENTS for:

  • a paper topic, arXiv ID, or Semantic Scholar ID
  • - max: N
  • - brief
  • - head
  • - section: NAME
  • - trending
  • - days: 7|14|30
  • - web
  • - sc

If the input looks like an arXiv ID and no explicit mode is provided, default to brief.

Step 2: Locate the Adapter

Resolve $DEEPXIV_FETCHER via the canonical strict-safe Codex chain

(see shared-references/integration-contract.md §2):

if [ -z "${ARIS_REPO:-}" ] && [ -f .aris/installed-skills-codex.txt ]; then
    ARIS_REPO=$(awk -F'\t' '$1=="repo_root"{print $2; exit}' .aris/installed-skills-codex.txt 2>/dev/null) || true
fi
DEEPXIV_FETCHER=""
[ -n "${ARIS_REPO:-}" ] && [ -f "$ARIS_REPO/tools/deepxiv_fetch.py" ] && DEEPXIV_FETCHER="$ARIS_REPO/tools/deepxiv_fetch.py"
[ -z "$DEEPXIV_FETCHER" ] && [ -f tools/deepxiv_fetch.py ] && DEEPXIV_FETCHER="tools/deepxiv_fetch.py"
[ -z "$DEEPXIV_FETCHER" ] && [ -f ~/.codex/skills/deepxiv/deepxiv_fetch.py ] && DEEPXIV_FETCHER="$HOME/.codex/skills/deepxiv/deepxiv_fetch.py"

# Smoke test (optional): resolved-but-non-functional adapter is not currently auto-demoted.
if [ -n "$DEEPXIV_FETCHER" ]; then
  echo "DeepXiv adapter resolved at: $DEEPXIV_FETCHER" >&2
else
  echo "DeepXiv adapter unresolved (canonical chain exhausted); raw deepxiv CLI fallback will be used." >&2
fi

If the adapter is unresolved, fall back to raw deepxiv commands.

Step 3: Execute the Minimal Command

[ -n "$DEEPXIV_FETCHER" ] && python3 "$DEEPXIV_FETCHER" search "QUERY" --max MAX_RESULTS
[ -n "$DEEPXIV_FETCHER" ] && python3 "$DEEPXIV_FETCHER" paper-brief ARXIV_ID
[ -n "$DEEPXIV_FETCHER" ] && python3 "$DEEPXIV_FETCHER" paper-head ARXIV_ID
[ -n "$DEEPXIV_FETCHER" ] && python3 "$DEEPXIV_FETCHER" paper-section ARXIV_ID "SECTION_NAME"
[ -n "$DEEPXIV_FETCHER" ] && python3 "$DEEPXIV_FETCHER" trending --days 7 --max MAX_RESULTS
[ -n "$DEEPXIV_FETCHER" ] && python3 "$DEEPXIV_FETCHER" wsearch "QUERY"
[ -n "$DEEPXIV_FETCHER" ] && python3 "$DEEPXIV_FETCHER" sc "SEMANTIC_SCHOLAR_ID"

Fallbacks:

deepxiv search "QUERY" --limit MAX_RESULTS --format json
deepxiv paper ARXIV_ID --brief --format json
deepxiv paper ARXIV_ID --head --format json
deepxiv paper ARXIV_ID --section "SECTION_NAME" --format json
deepxiv trending --days 7 --limit MAX_RESULTS --output json
deepxiv wsearch "QUERY" --output json
deepxiv sc "SEMANTIC_SCHOLAR_ID" --output json

Step 4: Present Results

For search results, present a compact literature table. For paper reads, summarize the title, authors, date, TLDR, and the next recommended depth step.

Step 5: Escalate Depth Only When Needed

Use the progression:

  • search
  • paper-brief
  • paper-head
  • paper-section

Only read the full paper when the user explicitly needs it.

Step 6: Update Research Wiki (if active)

If the project has an active research wiki and the user is building a literature set, add DeepXiv findings as source-backed entries with arXiv/Semantic Scholar IDs, retrieved sections, and the recommended next depth step.

Follow shared-references/integration-contract.md. If the wiki path or schema is unclear, ask before writing.

Key Rules

  • Prefer the adapter script over raw deepxiv commands when available.
  • If DeepXiv is missing, give the install command and suggest /arxiv or /research-lit "topic" - sources: web.
  • Use DeepXiv as an additive source, not a replacement for existing ARIS literature tooling.
  • If the result overlaps with a published venue paper from Semantic Scholar, keep the richer venue metadata in the final summary.

Other skills for the same job

different authors, same section of the catalogue
Content Research Writer
by frostant
×10

Assists in writing high-quality content by conducting research, adding citations, improving hooks, iterating on outlines, and providing real-time feedback on each section. Transforms your writing process from solo effort to collaborative partnership.

4k tokens
Lead Research Assistant
by frostant
×8

Identifies high-quality leads for your product or service by analyzing your business, searching for target companies, and providing actionable contact strategies. Perfect for sales, business development, and marketing professionals.

2k tokens
Notebooklm
by ZhanlinCui
×6

Use this skill to query your Google NotebookLM notebooks directly from Claude Code for source-grounded, citation-backed answers from Gemini. Browser automation, library management, persistent auth. Drastically reduced hallucinations through document-only responses.

26k tokens scripts
Biorxiv Database
by christophacham
×4

Efficient database search tool for bioRxiv preprint server. Use this skill when searching for life sciences preprints by keywords, authors, date ranges, or categories, retrieving paper metadata, downloading PDFs, or conducting literature reviews.

9k tokens scripts
Openalex Database
by christophacham
×4

Query and analyze scholarly literature using the OpenAlex database. This skill should be used when searching for academic papers, analyzing research trends, finding works by authors or institutions, tracking citations, discovering open access publications, or conducting bibliometric analysis across 240M+ scholarly works. Use for literature searches, research output analysis, citation analysis, and academic database queries.

13k tokens scripts
Uspto Database
by christophacham
×4

Access USPTO APIs for patent/trademark searches, examination history (PEDS), assignments, citations, office actions, TSDR, for IP analysis and prior art searches.

21k tokens scripts
Denario
by christophacham
×3

Multiagent AI system for scientific research assistance that automates research workflows from data analysis to publication. This skill should be used when generating research ideas from datasets, developing research methodologies, executing computational experiments, performing literature searches, or generating publication-ready papers in LaTeX format. Supports end-to-end research pipelines with customizable agent orchestration.

11k tokens
Hypogenic
by christophacham
×3

Automated LLM-driven hypothesis generation and testing on tabular datasets. Use when you want to systematically explore hypotheses about patterns in empirical data (e.g., deception detection, content analysis). Combines literature insights with data-driven hypothesis testing. For manual hypothesis formulation use hypothesis-generation; for creative ideation use scientific-brainstorming.

7k tokens

How to use it

Copy the folder

Take wanshuiyin/auto-claude-code-research-in-sleep-deepxiv from the repository into ~/.claude/skills for personal use, or into .claude/skills inside a project.

Check the name does not clash

The agent identifies a skill by the name field in its header. Two skills with the same name cannot sit side by side — one of them will be ignored.

Install what it needs

The instructions reference pip. Without those the skill loads but fails at the first command.