Run DeepSec against a Vercel project checkout from dev3000. Use for one-click DeepSec setup, project context bootstrapping, bounded first-pass processing, and report generation.
npx skills add https://github.com/vercel-labs/dev3000 --skill deepsec
Use this skill to turn the manual DeepSec workflow into a repeatable dev3000 run against the current Vercel project checkout.
/workspace/repo..deepsec/.env.local or any tracked file. The dev3000 runtime passes AI Gateway credentials through the process environment.process or revalidate command unless the user explicitly asks for a full DeepSec scan in run-specific instructions.README.md if present.AGENTS.md or CLAUDE.md if present..deepsec/ is absent, run npx --yes deepsec@latest init..deepsec/ already exists, do not force overwrite it.corepack pnpm install from .deepsec/.@anthropic-ai/claude-agent-sdk.corepack pnpm is unavailable, run pnpm install only after confirming pnpm exists..deepsec/node_modules/deepsec/SKILL.md..deepsec/data/<id>/SETUP.md..deepsec/data/<id>/INFO.md with concise project-specific context.INFO.md to roughly 50-100 lines.corepack pnpm deepsec scan from .deepsec/.corepack pnpm deepsec process --limit 25 --concurrency 2 --batch-size 3.--limit.corepack pnpm deepsec export --format md-dir --out ./findings..deepsec/findings/README.md summarizing that this bounded pass found no findings and include the exact commands that were run.corepack pnpm deepsec status, and generated finding files as validation.git diff --stat and make sure no secrets, node_modules, .env.local, or raw scan state are staged by accident.Integration with protocols.io API for managing scientific protocols. This skill should be used when working with protocols.io to search, create, update, or publish protocols; manage protocol steps and materials; handle discussions and comments; organize workspaces; upload and manage files; or integrate protocols.io functionality into workflows. Applicable for protocol discovery, collaborative protocol development, experiment tracking, lab protocol management, and scientific documentation.
Analyzes job descriptions and generates tailored resumes that highlight relevant experience, skills, and achievements to maximize interview chances
Generate Excalidraw diagrams from natural language descriptions. Use when asked to "create a diagram", "make a flowchart", "visualize a process", "draw a system architecture", "create a mind map", or "generate an Excalidraw file". Supports flowcharts, relationship diagrams, mind maps, and system architecture diagrams. Outputs .excalidraw JSON files that can be opened directly in Excalidraw.
Build and distribute Expo development clients locally or via TestFlight
Use when you have a written implementation plan to execute in a separate session with review checkpoints
Data structure for annotated matrices in single-cell analysis. Use when working with .h5ad files or integrating with the scverse ecosystem. This is the data format skill—for analysis workflows use scanpy; for probabilistic models use scvi-tools; for population-scale queries use cellxgene-census.
Benchling R&D platform integration. Access registry (DNA, proteins), inventory, ELN entries, workflows via API, build Benchling Apps, query Data Warehouse, for lab data management automation.
Comprehensive molecular biology toolkit. Use for sequence manipulation, file parsing (FASTA/GenBank/PDB), phylogenetics, and programmatic NCBI/PubMed access (Bio.Entrez). Best for batch processing, custom bioinformatics pipelines, BLAST automation. For quick lookups use gget; for multi-service integration use bioservices.
Take vercel-labs/dev3000-deepsec from the repository into ~/.claude/skills for personal
use, or into .claude/skills inside a project.
The agent identifies a skill by the name field in its header. Two skills with the
same name cannot sit side by side — one of them will be ignored.
The instructions reference npm, npx.
Without those the skill loads but fails at the first command.