Train ML models with scikit-learn, PyTorch, TensorFlow. Use for classification/regression, neural networks, hyperparameter tuning, or encountering overfitting, underfitting, convergence issues.
npx skills add https://github.com/secondsky/claude-skills --skill ml-model-training
Train machine learning models with proper data handling and evaluation.
import pandas as pd
from sklearn.model_selection import train_test_split
from sklearn.preprocessing import StandardScaler, LabelEncoder
# Load and clean data
df = pd.read_csv('data.csv')
df = df.dropna()
# Encode categorical variables
le = LabelEncoder()
df['category'] = le.fit_transform(df['category'])
# Split data (70/15/15)
X = df.drop('target', axis=1)
y = df['target']
X_train, X_temp, y_train, y_temp = train_test_split(X, y, test_size=0.3)
X_val, X_test, y_val, y_test = train_test_split(X_temp, y_temp, test_size=0.5)
# Scale features
scaler = StandardScaler()
X_train = scaler.fit_transform(X_train)
X_val = scaler.transform(X_val)
X_test = scaler.transform(X_test)
from sklearn.ensemble import RandomForestClassifier
from sklearn.metrics import classification_report, accuracy_score
model = RandomForestClassifier(n_estimators=100, random_state=42)
model.fit(X_train, y_train)
y_pred = model.predict(X_val)
print(classification_report(y_val, y_pred))
import torch
import torch.nn as nn
class Model(nn.Module):
def __init__(self, input_dim):
super().__init__()
self.layers = nn.Sequential(
nn.Linear(input_dim, 64),
nn.ReLU(),
nn.Dropout(0.3),
nn.Linear(64, 32),
nn.ReLU(),
nn.Linear(32, 1),
nn.Sigmoid()
)
def forward(self, x):
return self.layers(x)
model = Model(X_train.shape[1])
optimizer = torch.optim.Adam(model.parameters(), lr=0.001)
criterion = nn.BCELoss()
for epoch in range(100):
model.train()
optimizer.zero_grad()
output = model(X_train_tensor)
loss = criterion(output, y_train_tensor)
loss.backward()
optimizer.step()
| Task | Metrics |
|------|---------|
| Classification | Accuracy, Precision, Recall, F1, AUC-ROC |
| Regression | MSE, RMSE, MAE, R² |
Do:
Don't:
Problem: Scaling or transforming data before splitting leads to test set information leaking into training.
Solution: Always split data first, then fit transformers only on training data:
# ✅ Correct: Fit on train, transform train/val/test
scaler = StandardScaler()
X_train = scaler.fit_transform(X_train)
X_val = scaler.transform(X_val) # Only transform
X_test = scaler.transform(X_test) # Only transform
# ❌ Wrong: Fitting on all data
X_all = scaler.fit_transform(X) # Leaks test info!
Problem: Training on imbalanced datasets (e.g., 95% class A, 5% class B) leads to models that predict only the majority class.
Solution: Use class weights or resampling:
from sklearn.utils.class_weight import compute_class_weight
# Compute class weights
class_weights = compute_class_weight('balanced', classes=np.unique(y_train), y=y_train)
model = RandomForestClassifier(class_weight='balanced')
# Or use SMOTE for oversampling minority class
from imblearn.over_sampling import SMOTE
smote = SMOTE()
X_resampled, y_resampled = smote.fit_resample(X_train, y_train)
Problem: Complex models memorize training data, perform poorly on validation/test sets.
Solution: Add regularization techniques:
# Dropout in PyTorch
nn.Dropout(0.3)
# L2 regularization in scikit-learn
RandomForestClassifier(max_depth=10, min_samples_split=20)
# Early stopping in Keras
from tensorflow.keras.callbacks import EarlyStopping
early_stop = EarlyStopping(monitor='val_loss', patience=10, restore_best_weights=True)
model.fit(X_train, y_train, validation_data=(X_val, y_val), callbacks=[early_stop])
Problem: Results are not reproducible across runs, making debugging and comparison impossible.
Solution: Set all random seeds:
import random
import numpy as np
import torch
random.seed(42)
np.random.seed(42)
torch.manual_seed(42)
if torch.cuda.is_available():
torch.cuda.manual_seed_all(42)
Problem: Optimizing hyperparameters on test set leads to overfitting to test data.
Solution: Use validation set for tuning, test set only for final evaluation:
from sklearn.model_selection import GridSearchCV
# ✅ Correct: Tune on train+val, evaluate on test
param_grid = {'n_estimators': [50, 100, 200], 'max_depth': [5, 10, 15]}
grid_search = GridSearchCV(RandomForestClassifier(), param_grid, cv=5)
grid_search.fit(X_train, y_train) # Cross-validation on training set
best_model = grid_search.best_estimator_
# Final evaluation on held-out test set
final_score = best_model.score(X_test, y_test)
Load reference files when you need:
references/pytorch-training.md for complete training loops with early stopping, learning rate scheduling, and checkpointingreferences/tensorflow-keras.md for callback usage, custom training loops, and mobile deployment with TFLiteCreate new skills, modify and improve existing skills, and measure skill performance. Use when users want to create a skill from scratch, edit, or optimize an existing skill, run evals to test a skill, benchmark skill performance with variance analysis, or optimize a skill's description for better triggering accuracy.
Access NCBI GEO for gene expression/genomics data. Search/download microarray and RNA-seq datasets (GSE, GSM, GPL), retrieve SOFT/Matrix files, for transcriptomics and expression analysis.
Bayesian modeling with PyMC. Build hierarchical models, MCMC (NUTS), variational inference, LOO/WAIC comparison, posterior checks, for probabilistic programming and inference.
Multi-objective optimization framework. NSGA-II, NSGA-III, MOEA/D, Pareto fronts, constraint handling, benchmarks (ZDT, DTLZ), for engineering design and optimization problems.
Statistical modeling toolkit. OLS, GLM, logistic, ARIMA, time series, hypothesis tests, diagnostics, AIC/BIC, for rigorous statistical inference and econometric analysis.
Add unsigned integer (uint) type support to PyTorch operators by updating AT_DISPATCH macros. Use when adding support for uint16, uint32, uint64 types to operators, kernels, or when user mentions enabling unsigned types, barebones unsigned types, or uint support.
Convert PyTorch AT_DISPATCH macros to AT_DISPATCH_V2 format in ATen C++ code. Use when porting AT_DISPATCH_ALL_TYPES_AND*, AT_DISPATCH_FLOATING_TYPES*, or other dispatch macros to the new v2 API. For ATen kernel files, CUDA kernels, and native operator implementations.
Write docstrings for PyTorch functions and methods following PyTorch conventions. Use when writing or updating docstrings in PyTorch code.
Take secondsky/ml-model-training from the repository into ~/.claude/skills for personal
use, or into .claude/skills inside a project.
The agent identifies a skill by the name field in its header. Two skills with the
same name cannot sit side by side — one of them will be ignored.