mcpbeat Sign in

Wiki Builder Skill for Claude

Start, structure, and grow a persistent research wiki indexed in pro-workflow's SQLite knowledge base. Each wiki is a folder of markdown pages with provenance, plus a shadow FTS5 index so any session can recall it. Use when the user says "start a wiki", "add to wiki", "compile a page", "wiki on X", or wants a long-lived knowledge base on a topic, paper, product, person, project, or codebase.

6k tokens
context cost
the whole folder, loaded on every use
14
files
ships runnable scripts
0
copies elsewhere
how many repositories repackaged it
2755
stars on the repo
on the repository, not the skill itself

Install

one command, takes just this skill from the repository
npx skills add https://github.com/rohitg00/pro-workflow --skill wiki-builder

The instruction itself

11 sections, as written by the author

Wiki Builder

Persistent knowledge base for any topic. Markdown on disk + SQLite FTS5 shadow index.

When to use

  • "Start a wiki on <topic>"
  • "Add this paper / link / note to the <slug> wiki"
  • "Compile a concept page on X in <slug>"
  • "What does the <slug> wiki say about Y?" (delegates to wiki-query)
  • "List my wikis"

Locations

  • Global: ~/.pro-workflow/wikis/<slug>/ — default, never committed
  • Project: <project>/.claude/wikis/<slug>/ — pass --scope project, committable

Both register in the same ~/.pro-workflow/data.db.

Flavors

| Flavor | Use for |

|--------|---------|

| research | ongoing topic exploration |

| paper | one-paper deep dive |

| domain | broad subject area |

| product | product/tool KB |

| person | researcher/founder dossier |

| organization | company/lab profile |

| project | internal project KB |

| codebase | symbol/file-aware KB tied to a repo |

| incident | post-mortem KB |

Layout

<slug>/
├── wiki.config.md         # purpose, audience, page types, style, auto_research block
├── raw/                   # untouched source material (PDFs, scrapes, transcripts)
├── wiki/
│   └── index.md           # entry point, hand-curated TOC
├── derived/               # generated artifacts (surveys, charts, summaries)
├── prompts/               # per-task prompts (compile-page, lint, query)
├── logs/maintenance-log.md
└── sources.md             # one row per source: id | url | title | hash | fetched_at

Flavor adds folders: wiki/papers, wiki/concepts, wiki/people, wiki/products, wiki/timelines, wiki/questions.

CLI surface

node $SKILL_ROOT/scripts/wiki-cli.js init <slug> --title "X" --flavor research [--scope project] [--root <path>]
node $SKILL_ROOT/scripts/wiki-cli.js list
node $SKILL_ROOT/scripts/wiki-cli.js page <slug> <rel-path> --title "X" [--type concept|paper|person|...] [--from-file path]
node $SKILL_ROOT/scripts/wiki-cli.js reindex <slug>
node $SKILL_ROOT/scripts/wiki-cli.js info <slug>

init runs init_wiki.sh (mirrors dair layout) AND registers the wiki in SQLite. page writes markdown + upserts FTS row.

Workflow when invoked

  • Resolve action (init / ingest / compile / list / reindex / info).
  • Read wiki.config.md of the target wiki before any compile.
  • Every claim that lands in wiki/ must cite a row in sources.md (one citation = one source row).
  • After page write, call wiki-cli.js page so FTS index stays in sync.
  • Append a one-line entry to logs/maintenance-log.md per change.
  • Update wiki/index.md if new top-level page.

Quality bar

  • First page useful immediately, not stub.
  • Stable slug filenames (tool-use-benchmarks.md, not 2026-05-08-notes.md).
  • Separate raw source from compiled interpretation.
  • Cross-link related pages in same wiki via relative links.
  • Mark speculation with > SPECULATION: block.
  • No duplicate summaries — link existing page instead.
  • Generated pages stay navigable for future agents.

Privacy

Wikis with private: true in config never get fetched from web sources by wiki-research-loop. Local raw/ only.

Auto-research opt-in

Phase 3.3.0 ships builder + query only. Loop arrives in 3.3.1. To prep, wiki.config.md may include:

auto_research:
  enabled: false        # flip in 3.3.1
  max_pages_per_run: 5
  max_depth: 3
  budget_usd: 0.50
  fetchers: [web, arxiv, github]

Templates

See templates/ for wiki.config.md, index.md, prompt files. init_wiki.sh copies these into the new wiki root.

Other skills for the same job

different authors, same section of the catalogue
Biorxiv Database
by christophacham
×4

Efficient database search tool for bioRxiv preprint server. Use this skill when searching for life sciences preprints by keywords, authors, date ranges, or categories, retrieving paper metadata, downloading PDFs, or conducting literature reviews.

9k tokens scripts
Uspto Database
by christophacham
×4

Access USPTO APIs for patent/trademark searches, examination history (PEDS), assignments, citations, office actions, TSDR, for IP analysis and prior art searches.

21k tokens scripts
Kegg Database
by christophacham
×3

Direct REST API access to KEGG (academic use only). Pathway analysis, gene-pathway mapping, metabolic pathways, drug interactions, ID conversion. For Python workflows with multiple databases, prefer bioservices. Use this for direct HTTP/REST work or KEGG-specific control.

8k tokens scripts
Pubmed Database
by christophacham
×3

Direct REST API access to PubMed. Advanced Boolean/MeSH queries, E-utilities API, batch processing, citation management. For Python workflows, prefer biopython (Bio.Entrez). Use this for direct HTTP/REST work or custom API implementations.

11k tokens
Biomni
by ComeOnOliver
×2

Autonomous biomedical AI agent framework for executing complex research tasks across genomics, drug discovery, molecular biology, and clinical analysis. Use this skill when conducting multi-step biomedical research including CRISPR screening design, single-cell RNA-seq analysis, ADMET prediction, GWAS interpretation, rare disease diagnosis, or lab protocol optimization. Leverages LLM reasoning with code execution and integrated biomedical databases.

22k tokens scripts
Kegg Database
by ComeOnOliver
×2

Direct REST API access to KEGG (academic use only). Pathway analysis, gene-pathway mapping, metabolic pathways, drug interactions, ID conversion. For Python workflows with multiple databases, prefer bioservices. Use this for direct HTTP/REST work or KEGG-specific control.

10k tokens scripts
Pubmed Database
by ComeOnOliver
×2

Direct REST API access to PubMed. Advanced Boolean/MeSH queries, E-utilities API, batch processing, citation management. For Python workflows, prefer biopython (Bio.Entrez). Use this for direct HTTP/REST work or custom API implementations.

24k tokens
Uspto Database
by ComeOnOliver
×2

Access USPTO APIs for patent/trademark searches, examination history (PEDS), assignments, citations, office actions, TSDR, for IP analysis and prior art searches.

23k tokens scripts

How to use it

Copy the folder

Take rohitg00/wiki-builder from the repository into ~/.claude/skills for personal use, or into .claude/skills inside a project.

Check the name does not clash

The agent identifies a skill by the name field in its header. Two skills with the same name cannot sit side by side — one of them will be ignored.