Claude Skills
The open format is called Agent Skills and works in Claude Code, Codex, Cursor and other agents — most people know it as Claude Skills.
Every Agent Skill we could find on GitHub, deduplicated by content. 79 566 files from 1 758 authors, of which 61 913 are unique — the rest is the same skill repackaged into someone else's repository. For each one: what it weighs in tokens, whether it ships runnable scripts, and which MCP servers it needs.
| Generate and verify BibTeX entries from paper notes, writing `citations/ref.bib` and `citations/verified.jsonl`.
| Build a section-by-section claim–evidence matrix (`outline/claim_evidence_matrix.md`) from the outline and paper notes.
| Use when a review workspace has manuscript text and needs a traceable claim ledger.
| Rewrite `outline/claim_evidence_matrix.md` as a projection/index of evidence packs (NO PROSE), so claims/axes are driven by `outline/evidence_drafts.jsonl` rather than outline placeholders.
| Use when a broad paper candidate pool needs deterministic deduplication and a stable core set.
Score an existing reader-facing deliverable and emit a deterministic PASS/FAIL scorecard plus bounded repair plan; use after synthesis, not to rewrite content.
| Use when an approved tutorial spec exists and the run needs a deterministic prerequisite graph before module planning.
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| Audit and rewrite evaluation/numeric claims to ensure they carry minimal protocol context (task + metric + constraint) and avoid underspecified model naming.
| Use when `paper-review` needs a claim-by-claim evidence gap report grounded in an extracted claim ledger.
| Bind addressable evidence IDs from `papers/evidence_bank.jsonl` to each subsection (H3), producing `outline/evidence_bindings.jsonl`.
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| Use when a tutorial module plan exists but each module still needs a verifiable teaching loop.
| Use when `evidence-review` has screened includes and needs a schema-aligned extraction table.
| Write the survey's front matter files (Abstract, Introduction, Related Work, Discussion, Conclusion) in paper voice, with high citation density and a single evidence-policy paragraph.
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| Write one survey-quality paragraph from evidence packs (tension → contrast → evaluation anchor → limitation).
Review and record one pending human checkpoint in a research Workspace; use when a HUMAN Unit is blocked on an `Approve C*` decision, and never treat silence or artifact existence as approval.
| Screen the direction pool with a discussion-first scoring pass, writing `output/trace/IDEA_SCREENING_TABLE.md`.
| Synthesize the shortlist into a discussion-ready research idea brainstorm memo, writing `output/REPORT.md`, `output/APPENDIX.md`, and `output/REPORT.json`.
| Generate a compact pool of discussion-worthy research directions from the signal table, writing `output/trace/IDEA_DIRECTION_POOL.md`.
| Lock an ideation run into a single-source-of-truth brainstorm brief (`output/trace/IDEA_BRIEF.md`) and a replayable multi-query plan (`queries.md`).
| Converge the screened direction pool into a small, discussion-ready shortlist, writing `output/trace/IDEA_SHORTLIST.md`.
| Map paper notes + taxonomy into a signal table of tensions, missing pieces, and promising academic axes for brainstorm discussion. Writes `output/trace/IDEA_SIGNAL_TABLE.md`.
| Expand and refine search keywords (synonyms, acronyms, exclusions) and update `queries.md`.
| Rewrite limitation passages so the paper keeps limitations without falling into count-based slot phrases (e.g., \"Two limitations…\") across many H3s.
| Compile a LaTeX project and run basic QA (missing refs, bib errors, broken citations), producing `latex/main.pdf` and a build report.
| Multi-route literature expansion + metadata normalization for evidence-first surveys.
| Scaffold a LaTeX project (`latex/main.tex`, optional bibliography wiring, structure) from an existing Markdown draft.
| Use when `paper-review` needs a canonical manuscript text artifact before claim extraction.
| Use when a tutorial concept DAG exists and the run needs an ordered teaching plan with objectives and outputs.
| Use when a tutorial module plan exists and the run needs an auditable module-to-source grounding file before prose.
| Use when `paper-review` needs overlap/delta positioning against provided related work.
| Planner-pass coverage + redundancy report for an outline+mapping, producing `outline/coverage_report.md` and `outline/outline_state.jsonl`.
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| Write structured notes for each paper in the core set into `papers/paper_notes.jsonl` (summary/method/results/limitations).
| Convert a taxonomy (`outline/taxonomy.yml`) into a bullet-only outline (`outline/outline.yml`) with sections/subsections.
| Download PDFs (when available) and extract plain text to support full-text evidence, writing `papers/fulltext_index.jsonl` and `papers/fulltext/*.txt`.
| Deterministically compact final H3 bodies to the active delivery profile's paragraph budget without deleting prose or changing citation-block order.
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Route an unbound research Goal to one Workflow or materialize its initial C0 kickoff block; use during initial binding, not for later checkpoint summaries or approval.
| Use when `evidence-review` needs an operational protocol before screening and extraction.
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| Write `output/DRAFT.md` (or `output/SNAPSHOT.md`) from an approved outline and evidence packs, using only verified citation keys from `citations/ref.bib`.
Run a research Workflow end to end when the user requests a survey, brief, review, tutorial, or idea exploration; route an unbound goal, execute one eligible Unit at a time, and stop at checkpoints or diagnosed failures.
| Remove repeated boilerplate across sections (methodology disclaimers, generic transitions, repeated summaries) while preserving citations and meaning.
| Use when `paper-review` has claims plus evidence gaps and needs the final referee-style report.
| Normalize cross-skill JSONL interfaces (ids + titles + citation key formats) so downstream skills do not rely on best-effort joins.
| Use when an approved `evidence-review` protocol needs to be applied to a candidate pool.
| Bind papers to chapter-level sections first, writing `outline/section_bindings.jsonl` and `outline/section_binding_report.md`.
| Build chapter-level briefs (`outline/section_briefs.jsonl`) from chapter skeleton plus section bindings before stable H3 decomposition.
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| Map papers from the core set to each outline subsection and write `outline/mapping.tsv` with coverage tracking.
| Use when a `research-brief` workspace has a small paper set plus outline and needs a compact reader-facing briefing instead of a full survey.
| Deterministically merge the final fingerprinted section snapshot into `output/DRAFT.md`, preserving outline order and inserting transitions only when explicitly enabled.
| Fetch and normalize supported source-tutorial inputs into local, traceable text artifacts.
| Use when a `source-tutorial` workspace has ingested sources and needs a grounded tutorial contract before structure planning.
| De-slot and harmonize paper voice across `sections/*.md` without changing meaning or citation keys.
Claude Skills — questions
Answers built from the skills we actually parsed.