High-level PyTorch framework with Trainer class, automatic distributed training (DDP/FSDP/DeepSpeed), callbacks system, and minimal boilerplate. Scales from laptop to supercomputer with same code. Use when you want clean training loops with built-in best practices.
npx skills add https://github.com/Orchestra-Research/AI-Research-SKILLs --skill pytorch-lightning
PyTorch Lightning organizes PyTorch code to eliminate boilerplate while maintaining flexibility.
Installation:
pip install lightning
Convert PyTorch to Lightning (3 steps):
import lightning as L
import torch
from torch import nn
from torch.utils.data import DataLoader, Dataset
# Step 1: Define LightningModule (organize your PyTorch code)
class LitModel(L.LightningModule):
def __init__(self, hidden_size=128):
super().__init__()
self.model = nn.Sequential(
nn.Linear(28 * 28, hidden_size),
nn.ReLU(),
nn.Linear(hidden_size, 10)
)
def training_step(self, batch, batch_idx):
x, y = batch
y_hat = self.model(x)
loss = nn.functional.cross_entropy(y_hat, y)
self.log('train_loss', loss) # Auto-logged to TensorBoard
return loss
def configure_optimizers(self):
return torch.optim.Adam(self.parameters(), lr=1e-3)
# Step 2: Create data
train_loader = DataLoader(train_dataset, batch_size=32)
# Step 3: Train with Trainer (handles everything else!)
trainer = L.Trainer(max_epochs=10, accelerator='gpu', devices=2)
model = LitModel()
trainer.fit(model, train_loader)
That's it! Trainer handles:
Original PyTorch code:
model = MyModel()
optimizer = torch.optim.Adam(model.parameters())
model.to('cuda')
for epoch in range(max_epochs):
for batch in train_loader:
batch = batch.to('cuda')
optimizer.zero_grad()
loss = model(batch)
loss.backward()
optimizer.step()
Lightning version:
class LitModel(L.LightningModule):
def __init__(self):
super().__init__()
self.model = MyModel()
def training_step(self, batch, batch_idx):
loss = self.model(batch) # No .to('cuda') needed!
return loss
def configure_optimizers(self):
return torch.optim.Adam(self.parameters())
# Train
trainer = L.Trainer(max_epochs=10, accelerator='gpu')
trainer.fit(LitModel(), train_loader)
Benefits: 40+ lines → 15 lines, no device management, automatic distributed
class LitModel(L.LightningModule):
def __init__(self):
super().__init__()
self.model = MyModel()
def training_step(self, batch, batch_idx):
x, y = batch
y_hat = self.model(x)
loss = nn.functional.cross_entropy(y_hat, y)
self.log('train_loss', loss)
return loss
def validation_step(self, batch, batch_idx):
x, y = batch
y_hat = self.model(x)
val_loss = nn.functional.cross_entropy(y_hat, y)
acc = (y_hat.argmax(dim=1) == y).float().mean()
self.log('val_loss', val_loss)
self.log('val_acc', acc)
def test_step(self, batch, batch_idx):
x, y = batch
y_hat = self.model(x)
test_loss = nn.functional.cross_entropy(y_hat, y)
self.log('test_loss', test_loss)
def configure_optimizers(self):
return torch.optim.Adam(self.parameters(), lr=1e-3)
# Train with validation
trainer = L.Trainer(max_epochs=10)
trainer.fit(model, train_loader, val_loader)
# Test
trainer.test(model, test_loader)
Automatic features:
# Same code as single GPU!
model = LitModel()
# 8 GPUs with DDP (automatic!)
trainer = L.Trainer(
accelerator='gpu',
devices=8,
strategy='ddp' # Or 'fsdp', 'deepspeed'
)
trainer.fit(model, train_loader)
Launch:
# Single command, Lightning handles the rest
python train.py
No changes needed:
num_nodes=2)from lightning.pytorch.callbacks import ModelCheckpoint, EarlyStopping, LearningRateMonitor
# Create callbacks
checkpoint = ModelCheckpoint(
monitor='val_loss',
mode='min',
save_top_k=3,
filename='model-{epoch:02d}-{val_loss:.2f}'
)
early_stop = EarlyStopping(
monitor='val_loss',
patience=5,
mode='min'
)
lr_monitor = LearningRateMonitor(logging_interval='epoch')
# Add to Trainer
trainer = L.Trainer(
max_epochs=100,
callbacks=[checkpoint, early_stop, lr_monitor]
)
trainer.fit(model, train_loader, val_loader)
Result:
class LitModel(L.LightningModule):
# ... (training_step, etc.)
def configure_optimizers(self):
optimizer = torch.optim.Adam(self.parameters(), lr=1e-3)
# Cosine annealing
scheduler = torch.optim.lr_scheduler.CosineAnnealingLR(
optimizer,
T_max=100,
eta_min=1e-5
)
return {
'optimizer': optimizer,
'lr_scheduler': {
'scheduler': scheduler,
'interval': 'epoch', # Update per epoch
'frequency': 1
}
}
# Learning rate auto-logged!
trainer = L.Trainer(max_epochs=100)
trainer.fit(model, train_loader)
Use PyTorch Lightning when:
Key advantages:
Use alternatives instead:
Issue: Loss not decreasing
Check data and model setup:
# Add to training_step
def training_step(self, batch, batch_idx):
if batch_idx == 0:
print(f"Batch shape: {batch[0].shape}")
print(f"Labels: {batch[1]}")
loss = ...
return loss
Issue: Out of memory
Reduce batch size or use gradient accumulation:
trainer = L.Trainer(
accumulate_grad_batches=4, # Effective batch = batch_size × 4
precision='bf16' # Or 'fp16', reduces memory 50%
)
Issue: Validation not running
Ensure you pass val_loader:
# WRONG
trainer.fit(model, train_loader)
# CORRECT
trainer.fit(model, train_loader, val_loader)
Issue: DDP spawns multiple processes unexpectedly
Lightning auto-detects GPUs. Explicitly set devices:
# Test on CPU first
trainer = L.Trainer(accelerator='cpu', devices=1)
# Then GPU
trainer = L.Trainer(accelerator='gpu', devices=1)
Callbacks: See references/callbacks.md for EarlyStopping, ModelCheckpoint, custom callbacks, and callback hooks.
Distributed strategies: See references/distributed.md for DDP, FSDP, DeepSpeed ZeRO integration, multi-node setup.
Hyperparameter tuning: See references/hyperparameter-tuning.md for integration with Optuna, Ray Tune, and WandB sweeps.
Precision options:
Create new skills, modify and improve existing skills, and measure skill performance. Use when users want to create a skill from scratch, edit, or optimize an existing skill, run evals to test a skill, benchmark skill performance with variance analysis, or optimize a skill's description for better triggering accuracy.
Access NCBI GEO for gene expression/genomics data. Search/download microarray and RNA-seq datasets (GSE, GSM, GPL), retrieve SOFT/Matrix files, for transcriptomics and expression analysis.
Bayesian modeling with PyMC. Build hierarchical models, MCMC (NUTS), variational inference, LOO/WAIC comparison, posterior checks, for probabilistic programming and inference.
Multi-objective optimization framework. NSGA-II, NSGA-III, MOEA/D, Pareto fronts, constraint handling, benchmarks (ZDT, DTLZ), for engineering design and optimization problems.
Statistical modeling toolkit. OLS, GLM, logistic, ARIMA, time series, hypothesis tests, diagnostics, AIC/BIC, for rigorous statistical inference and econometric analysis.
Add unsigned integer (uint) type support to PyTorch operators by updating AT_DISPATCH macros. Use when adding support for uint16, uint32, uint64 types to operators, kernels, or when user mentions enabling unsigned types, barebones unsigned types, or uint support.
Convert PyTorch AT_DISPATCH macros to AT_DISPATCH_V2 format in ATen C++ code. Use when porting AT_DISPATCH_ALL_TYPES_AND*, AT_DISPATCH_FLOATING_TYPES*, or other dispatch macros to the new v2 API. For ATen kernel files, CUDA kernels, and native operator implementations.
Write docstrings for PyTorch functions and methods following PyTorch conventions. Use when writing or updating docstrings in PyTorch code.
Take orchestra-research/pytorch-lightning from the repository into ~/.claude/skills for personal
use, or into .claude/skills inside a project.
The agent identifies a skill by the name field in its header. Two skills with the
same name cannot sit side by side — one of them will be ignored.
The instructions reference pip.
Without those the skill loads but fails at the first command.