Initialize plugin in a project — install Iron Laws, auto-activation rules, and reference auto-loading into CLAUDE.md. Use when setting up or updating the plugin.
npx skills add https://github.com/oliver-kriska/claude-elixir-phoenix --skill phx-init
Install the Elixir/Phoenix plugin's behavioral instructions into the project's CLAUDE.md.
phx-init # First-time installation
phx-init --update # Update existing installation with latest rules
Use Glob to check if CLAUDE.md exists. Then use Grep to check for existing ELIXIR-PHOENIX-PLUGIN:START marker in CLAUDE.md.
Scan the project to customize the injected instructions:
Read mix.exs and use Grep to extract:
phoenix.*"~> in mix.exsecto.*"~> in mix.exs"oban" and "oban_pro" in mix.exs"ash", "surface" in mix.exs"tidewave" in mix.exslib/**/*.ex filesMode A: Fresh Install (no CLAUDE.md or no markers)
Mode B: Update (--update flag or markers exist)
<!-- ELIXIR-PHOENIX-PLUGIN:START --> and <!-- ELIXIR-PHOENIX-PLUGIN:END -->CRITICAL: NEVER overwrite or delete existing CLAUDE.md content outside the plugin markers — user-written rules, project conventions, and other plugin sections must be preserved verbatim
Write the following structure to CLAUDE.md:
<!-- ELIXIR-PHOENIX-PLUGIN:START -->
<!-- Last updated: {date} | Plugin version: 1.0 | Stack: Phoenix {version}, Ecto {version}, {optional: Oban, Tidewave} -->
# Elixir/Phoenix Plugin - Auto-Activation Rules
{Include all sections from the Content Template below, filtered by detected stack}
<!-- ELIXIR-PHOENIX-PLUGIN:END -->
If command -v codex succeeds (or the user asks): offer to install a
managed ## Review guidelines block into the project's AGENTS.md —
honored by BOTH codex exec review locally and the Codex cloud PR
reviewer. Follow the install rules and exact block in
references/codex-review-guidelines.md: markers
ELIXIR-PHOENIX-REVIEW-GUIDELINES:START/END, upsert in place on
--update, never touch content outside markers, and STOP to ask if an
unmanaged ## Review guidelines section already exists. When codex is
absent and not requested, skip silently — never mention codex to users
who don't have it.
✅ Elixir/Phoenix plugin initialized
Detected stack:
- Phoenix {version}
- Ecto {version}
- {Oban standard | Oban Pro | not detected}
- {Tidewave ✓ | Tidewave not detected}
- {Ash Framework detected - Ecto patterns disabled | not detected}
Added to CLAUDE.md:
- Auto-activation rules (complexity detection, interview mode)
- Agent trigger patterns ({n} agents available)
- Reference auto-loading ({n} reference docs)
- Iron Laws enforcement ({n} laws)
- Verification rules
{- Codex review guidelines → AGENTS.md (only if installed in Step 4b)}
Run phx-init --update after plugin updates.
Run phx-audit for a full project health check.
The exact content to inject is in references/injectable-template.md.
Key structure:
{OBAN_SECTION} — If Oban detected (not Pro){OBAN_PRO_SECTION} — If Oban Pro detected{ASH_SECTION} — If Ash Framework detected{TIDEWAVE_SECTION} — If Tidewave detectedPlaceholder substitution:
| Placeholder | Source |
|-------------|--------|
| {DATE} | Current date |
| {PHOENIX_VERSION} | From mix.exs |
| {ECTO_VERSION} | From mix.exs |
| {OPTIONAL_STACK} | Detected optional deps |
See references/injectable-template.md for full template with all placeholders and conditional sections.
After running phx-init:
| Scenario | Action |
|----------|--------|
| CLAUDE.md read-only | Error: "Cannot modify CLAUDE.md - check permissions" |
| Markers corrupted | Warn, offer to remove and reinstall |
| Unknown Phoenix version | Use conservative defaults (all features enabled) |
| Not an Elixir project | Error: "No mix.exs found - is this an Elixir project?" |
| Command | When to Use |
|---------|-------------|
| phx-init | First time, or after plugin updates |
| phx-audit | Periodic project health check |
| phx-verify | After code changes |
Integration with protocols.io API for managing scientific protocols. This skill should be used when working with protocols.io to search, create, update, or publish protocols; manage protocol steps and materials; handle discussions and comments; organize workspaces; upload and manage files; or integrate protocols.io functionality into workflows. Applicable for protocol discovery, collaborative protocol development, experiment tracking, lab protocol management, and scientific documentation.
Analyzes job descriptions and generates tailored resumes that highlight relevant experience, skills, and achievements to maximize interview chances
Generate Excalidraw diagrams from natural language descriptions. Use when asked to "create a diagram", "make a flowchart", "visualize a process", "draw a system architecture", "create a mind map", or "generate an Excalidraw file". Supports flowcharts, relationship diagrams, mind maps, and system architecture diagrams. Outputs .excalidraw JSON files that can be opened directly in Excalidraw.
Build and distribute Expo development clients locally or via TestFlight
Use when you have a written implementation plan to execute in a separate session with review checkpoints
Data structure for annotated matrices in single-cell analysis. Use when working with .h5ad files or integrating with the scverse ecosystem. This is the data format skill—for analysis workflows use scanpy; for probabilistic models use scvi-tools; for population-scale queries use cellxgene-census.
Benchling R&D platform integration. Access registry (DNA, proteins), inventory, ELN entries, workflows via API, build Benchling Apps, query Data Warehouse, for lab data management automation.
Comprehensive molecular biology toolkit. Use for sequence manipulation, file parsing (FASTA/GenBank/PDB), phylogenetics, and programmatic NCBI/PubMed access (Bio.Entrez). Best for batch processing, custom bioinformatics pipelines, BLAST automation. For quick lookups use gget; for multi-service integration use bioservices.
Take oliver-kriska/phx-init from the repository into ~/.claude/skills for personal
use, or into .claude/skills inside a project.
The agent identifies a skill by the name field in its header. Two skills with the
same name cannot sit side by side — one of them will be ignored.