Database comparison catalogs, RDBMS vs NoSQL selection criteria, CAP/ACID/BASE theory, OLTP vs OLAP, and technology-specific characteristics
npx skills add https://github.com/nWave-ai/nWave --skill nw-database-technology-selection
Start with these questions:
Strengths: Full ACID, advanced cost-based optimizer, rich indexes (B-tree, Hash, GiST, GIN, BRIN), JSONB | Best for: complex queries, mixed OLTP/analytics, geospatial (PostGIS), JSON+relational hybrid | Scaling: read replicas, partitioning, PgBouncer, Citus for horizontal | Watch: write-heavy needs tuning, vertical scaling limits
Strengths: RAC clustering, Data Guard, Flashback, mature optimizer, partitioning | Best for: enterprise OLTP, mission-critical with vendor support, large-scale DW | Scaling: RAC horizontal, partitioning, Active Data Guard read replicas | Watch: licensing cost, vendor lock-in
Strengths: BI integration (SSRS/SSAS/SSIS), Always On AG, TDE built-in, columnstore indexes | Best for: Microsoft ecosystem, BI-heavy, hybrid OLTP/analytics | Scaling: Always On AG for HA, read-scale replicas, partitioning | Watch: Windows-centric, licensing model
Strengths: Simplicity, wide adoption, InnoDB ACID, good read performance, easy replication | Best for: web apps, read-heavy, simple transactional systems | Scaling: primary-replica, Group Replication, MySQL Router | Watch: less sophisticated optimizer than PostgreSQL, limited window functions in older versions
JSON-like documents, flexible schemas | Best for: CMS, catalogs, user profiles, rapid prototyping | Query: MongoDB aggregation pipeline, Couchbase N1QL | Indexing: compound (ESR rule: Equality-Sort-Range), text, geospatial | Trade-offs: flexible schema vs consistency enforcement, $lookup joins expensive
Simple key-value pairs, values can be complex structures | Best for: caching, sessions, leaderboards, shopping carts | Redis: in-memory sub-ms, FT.SEARCH/FT.AGGREGATE | DynamoDB: single-digit ms at any scale, Query on partition+sort key | Trade-offs: Redis limited by RAM, DynamoDB requires careful partition key design
Wide columns grouped into column families, partitioned by partition key | Best for: write-heavy, time-series, IoT, event logging, audit trails | Cassandra CQL: SQL-like, must include partition key, no joins | Linear horizontal scaling, SAI indexing 43% throughput gain over SASI | Trade-offs: query flexibility limited to partition key, query-first schema design, strong consistency causes up to 95% perf degradation
Nodes and edges with properties, index-free adjacency | Best for: social networks, recommendations, fraud detection, knowledge graphs | Neo4j Cypher (pattern matching), ArangoDB AQL (multi-model) | Relationship traversals far more efficient than recursive SQL CTEs | Trade-offs: not suited for aggregation-heavy analytics, scaling more complex
Atomicity: all-or-nothing | Consistency: valid state transitions | Isolation: concurrent transactions don't interfere (levels: READ UNCOMMITTED/COMMITTED, REPEATABLE READ, SERIALIZABLE) | Durability: committed data survives failures | Use when: financial transactions, inventory, order processing, data correctness non-negotiable
Basically Available | Soft state (may change without input) | Eventually consistent | Use when: availability > immediate consistency (social feeds, recommendations, activity streams)
During network partition, choose:
PACELC extension: even without partitions, latency vs consistency trade-off exists.
Many short atomic transactions (INSERT/UPDATE/DELETE) | Normalized 3NF | Simple queries, few rows, ms response | High write concurrency, ACID required | DBs: PostgreSQL, MySQL, Oracle, SQL Server
Complex analytical queries with aggregations | Denormalized star/snowflake | Complex SELECTs with JOINs, GROUP BY, window functions, seconds-minutes response | Read-heavy, fewer concurrent users | DBs: Snowflake, Redshift, BigQuery, Druid, ClickHouse
Combines OLTP+OLAP in single system | Examples: TiDB, CockroachDB, SingleStore, SQL Server with columnstore | Trade-off: convenience vs potential performance compromise for both workloads
Efficient database search tool for bioRxiv preprint server. Use this skill when searching for life sciences preprints by keywords, authors, date ranges, or categories, retrieving paper metadata, downloading PDFs, or conducting literature reviews.
Access BRENDA enzyme database via SOAP API. Retrieve kinetic parameters (Km, kcat), reaction equations, organism data, and substrate-specific enzyme information for biochemical research and metabolic pathway analysis.
Access ClinPGx pharmacogenomics data (successor to PharmGKB). Query gene-drug interactions, CPIC guidelines, allele functions, for precision medicine and genotype-guided dosing decisions.
Query NCBI ClinVar for variant clinical significance. Search by gene/position, interpret pathogenicity classifications, access via E-utilities API or FTP, annotate VCFs, for genomic medicine.
Access COSMIC cancer mutation database. Query somatic mutations, Cancer Gene Census, mutational signatures, gene fusions, for cancer research and precision oncology. Requires authentication.
Query Ensembl genome database REST API for 250+ species. Gene lookups, sequence retrieval, variant analysis, comparative genomics, orthologs, VEP predictions, for genomic research.
Query openFDA API for drugs, devices, adverse events, recalls, regulatory submissions (510k, PMA), substance identification (UNII), for FDA regulatory data analysis and safety research.
Query NCBI Gene via E-utilities/Datasets API. Search by symbol/ID, retrieve gene info (RefSeqs, GO, locations, phenotypes), batch lookups, for gene annotation and functional analysis.
Take nwave-ai/nw-database-technology-selection from the repository into ~/.claude/skills for personal
use, or into .claude/skills inside a project.
The agent identifies a skill by the name field in its header. Two skills with the
same name cannot sit side by side — one of them will be ignored.