> Triggers on "absolute upgrade", "upgrade our dependencies", "bump deps", "update packages", "move off the deprecated X", "clear the Dependabot backlog".
npx skills add https://github.com/maddhruv/absolute --skill absolute-upgrade
> Start your first response with the ⬆️ emoji.
Bring dependencies current — safely, in risk-ranked waves, with tests green after each.
Not a blind npm update: outdated and vulnerable deps are grouped by blast radius
(patch/minor → safe wave; major/breaking → gated, one at a time, changelog-read), applied
incrementally, and verified against the project's own test suite.
Runs the shared engine in references/health-engine.md — read it for the
DETECT → SCAN → TRIAGE → FIX → VERIFY → REPORT loop and the safety contract. This file
covers only what's specific to dependency upgrades.
npm outdated / Dependabot backlog without 40 separate PRs.Not for: adding a *new* dependency (that's a work/feature decision), or auditing
*vulnerabilities* specifically → use /absolute audit (it triages CVEs; upgrade
moves versions).
Per ecosystem, list outdated deps with current → wanted → latest and the jump type:
| Ecosystem | Detect outdated | Lockfile / manifest |
|---|---|---|
| npm | npm outdated --json | package-lock.json |
| pnpm | pnpm outdated --format json | pnpm-lock.yaml |
| yarn | yarn outdated --json | yarn.lock |
| Python (pip) | pip list --outdated --format=json | requirements*.txt |
| Python (poetry/uv) | poetry show --outdated / uv pip list --outdated | pyproject.toml + lock |
| Go | go list -u -m -json all | go.mod / go.sum |
Also flag: deps with known deprecations, duplicate/multiple versions of the same package,
and direct vs transitive (only direct deps are upgrade targets; transitives follow).
Group the upgrade plan into waves by semver jump — safest first:
| Wave | Jump | Default |
|---|---|---|
| 1 | patch (x.y.Z) | batch together, fix now |
| 2 | minor (x.Y.z) | batch by package family, fix now |
| 3 | major (X.y.z) / pre-1.0 minor | one at a time, gated — read the changelog/migration guide first, list breaking changes |
For every major bump: locate breaking changes (CHANGELOG, release notes, codemod if the
package ships one), inventory call sites that touch the changed API, and state the
migration before applying. Peer-dependency conflicts get resolved in the same wave as
their driver.
install is not a passing upgrade).
build breaks. Use the package's codemod where one exists.
keep the green waves. Never --force / --legacy-peer-deps to mask a real conflict.
lockfile ships untested transitive versions. Always regenerate.
which change broke it. Majors are always solo.
npm install succeeding proves nothing — run tests.dependency tree to dodge it silently.
/absolute audit — if the goal is fixing *vulnerabilities*, start there; it'll routeback here for the version moves.
/absolute deflake — flaky tests can mask whether an upgrade truly passed./absolute work — if an upgrade needs real feature-level migration work, hand off.Integration with protocols.io API for managing scientific protocols. This skill should be used when working with protocols.io to search, create, update, or publish protocols; manage protocol steps and materials; handle discussions and comments; organize workspaces; upload and manage files; or integrate protocols.io functionality into workflows. Applicable for protocol discovery, collaborative protocol development, experiment tracking, lab protocol management, and scientific documentation.
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Build and distribute Expo development clients locally or via TestFlight
Use when you have a written implementation plan to execute in a separate session with review checkpoints
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Benchling R&D platform integration. Access registry (DNA, proteins), inventory, ELN entries, workflows via API, build Benchling Apps, query Data Warehouse, for lab data management automation.
Comprehensive molecular biology toolkit. Use for sequence manipulation, file parsing (FASTA/GenBank/PDB), phylogenetics, and programmatic NCBI/PubMed access (Bio.Entrez). Best for batch processing, custom bioinformatics pipelines, BLAST automation. For quick lookups use gget; for multi-service integration use bioservices.
Take maddhruv/absolute-upgrade from the repository into ~/.claude/skills for personal
use, or into .claude/skills inside a project.
The agent identifies a skill by the name field in its header. Two skills with the
same name cannot sit side by side — one of them will be ignored.
The instructions reference uv, npm.
Without those the skill loads but fails at the first command.