Database migration patterns and schema versioning
npx skills add https://github.com/langchain-ai/skills-benchmarks --skill database-migrations
Manage database schema changes safely and reliably.
migrations/
001_create_users.sql
002_add_email_index.sql
003_create_orders.sql
-- migrations/004_add_user_status.sql
-- Up
ALTER TABLE users ADD COLUMN status VARCHAR(20) DEFAULT 'active';
CREATE INDEX idx_users_status ON users(status);
-- Down
DROP INDEX idx_users_status;
ALTER TABLE users DROP COLUMN status;
-- migrations/005_create_audit_log.sql
-- Up
CREATE TABLE audit_log (
id SERIAL PRIMARY KEY,
table_name VARCHAR(100) NOT NULL,
record_id INTEGER NOT NULL,
action VARCHAR(20) NOT NULL,
changed_by INTEGER REFERENCES users(id),
changed_at TIMESTAMP DEFAULT NOW(),
old_values JSONB,
new_values JSONB
);
CREATE INDEX idx_audit_log_table ON audit_log(table_name, record_id);
CREATE INDEX idx_audit_log_time ON audit_log(changed_at);
-- Down
DROP TABLE audit_log;
CREATE INDEX CONCURRENTLYEfficient database search tool for bioRxiv preprint server. Use this skill when searching for life sciences preprints by keywords, authors, date ranges, or categories, retrieving paper metadata, downloading PDFs, or conducting literature reviews.
Access BRENDA enzyme database via SOAP API. Retrieve kinetic parameters (Km, kcat), reaction equations, organism data, and substrate-specific enzyme information for biochemical research and metabolic pathway analysis.
Access ClinPGx pharmacogenomics data (successor to PharmGKB). Query gene-drug interactions, CPIC guidelines, allele functions, for precision medicine and genotype-guided dosing decisions.
Query NCBI ClinVar for variant clinical significance. Search by gene/position, interpret pathogenicity classifications, access via E-utilities API or FTP, annotate VCFs, for genomic medicine.
Access COSMIC cancer mutation database. Query somatic mutations, Cancer Gene Census, mutational signatures, gene fusions, for cancer research and precision oncology. Requires authentication.
Query Ensembl genome database REST API for 250+ species. Gene lookups, sequence retrieval, variant analysis, comparative genomics, orthologs, VEP predictions, for genomic research.
Query openFDA API for drugs, devices, adverse events, recalls, regulatory submissions (510k, PMA), substance identification (UNII), for FDA regulatory data analysis and safety research.
Query NCBI Gene via E-utilities/Datasets API. Search by symbol/ID, retrieve gene info (RefSeqs, GO, locations, phenotypes), batch lookups, for gene annotation and functional analysis.
Take langchain-ai/database-migrations from the repository into ~/.claude/skills for personal
use, or into .claude/skills inside a project.
The agent identifies a skill by the name field in its header. Two skills with the
same name cannot sit side by side — one of them will be ignored.