Use when optimizing PostgreSQL queries, configuring replication, or implementing advanced database features. Invoke for EXPLAIN analysis, JSONB operations, extension usage, VACUUM tuning, performance monitoring.
npx skills add https://github.com/Jeffallan/claude-skills --skill postgres-pro
Senior PostgreSQL expert with deep expertise in database administration, performance optimization, and advanced PostgreSQL features.
EXPLAIN (ANALYZE, BUFFERS) to identify bottlenecksEXPLAIN before deployingANALYZE to refresh statisticspg_stat views; verify improvements after each change-- Step 1: Identify slow queries
SELECT query, mean_exec_time, calls
FROM pg_stat_statements
ORDER BY mean_exec_time DESC
LIMIT 10;
-- Step 2: Analyze a specific slow query
EXPLAIN (ANALYZE, BUFFERS, FORMAT TEXT)
SELECT * FROM orders WHERE customer_id = 42 AND status = 'pending';
-- Look for: Seq Scan (bad on large tables), high Buffers hit, nested loops on large sets
-- Step 3: Create a targeted index
CREATE INDEX CONCURRENTLY idx_orders_customer_status
ON orders (customer_id, status)
WHERE status = 'pending'; -- partial index reduces size
-- Step 4: Verify the index is used
EXPLAIN (ANALYZE, BUFFERS)
SELECT * FROM orders WHERE customer_id = 42 AND status = 'pending';
-- Confirm: Index Scan on idx_orders_customer_status, lower actual time
-- Step 5: Update statistics if needed after bulk changes
ANALYZE orders;
Load detailed guidance based on context:
| Topic | Reference | Load When |
|-------|-----------|-----------|
| Performance | references/performance.md | EXPLAIN ANALYZE, indexes, statistics, query tuning |
| JSONB | references/jsonb.md | JSONB operators, indexing, GIN indexes, containment |
| Extensions | references/extensions.md | PostGIS, pg_trgm, pgvector, uuid-ossp, pg_stat_statements |
| Replication | references/replication.md | Streaming replication, logical replication, failover |
| Maintenance | references/maintenance.md | VACUUM, ANALYZE, pg_stat views, monitoring, bloat |
-- Create GIN index for containment queries
CREATE INDEX idx_events_payload ON events USING GIN (payload);
-- Efficient JSONB containment query (uses GIN index)
SELECT * FROM events WHERE payload @> '{"type": "login", "success": true}';
-- Extract nested value
SELECT payload->>'user_id', payload->'meta'->>'ip'
FROM events
WHERE payload @> '{"type": "login"}';
-- Check tables with high dead tuple counts
SELECT relname, n_dead_tup, n_live_tup,
round(n_dead_tup::numeric / NULLIF(n_live_tup + n_dead_tup, 0) * 100, 2) AS dead_pct,
last_autovacuum
FROM pg_stat_user_tables
ORDER BY n_dead_tup DESC
LIMIT 20;
-- Manually vacuum a high-churn table and verify
VACUUM (ANALYZE, VERBOSE) orders;
-- On primary: check standby lag
SELECT client_addr, state, sent_lsn, write_lsn, flush_lsn, replay_lsn,
(sent_lsn - replay_lsn) AS replication_lag_bytes
FROM pg_stat_replication;
EXPLAIN (ANALYZE, BUFFERS) for query optimizationEXPLAIN before and after creationCREATE INDEX CONCURRENTLY to avoid table locks in productionANALYZE after bulk data changes to refresh statisticsautovacuum_vacuum_scale_factor for high-churn tablespg_stat_replicationuuid type for UUIDs, not textSELECT * in production queriesWhen implementing PostgreSQL solutions, provide:
EXPLAIN (ANALYZE, BUFFERS) output and interpretationPostgreSQL 12-16, EXPLAIN ANALYZE, B-tree/GIN/GiST/BRIN indexes, JSONB operators, streaming replication, logical replication, VACUUM/ANALYZE, pg_stat views, PostGIS, pgvector, pg_trgm, WAL archiving, PITR
Efficient database search tool for bioRxiv preprint server. Use this skill when searching for life sciences preprints by keywords, authors, date ranges, or categories, retrieving paper metadata, downloading PDFs, or conducting literature reviews.
Access BRENDA enzyme database via SOAP API. Retrieve kinetic parameters (Km, kcat), reaction equations, organism data, and substrate-specific enzyme information for biochemical research and metabolic pathway analysis.
Access ClinPGx pharmacogenomics data (successor to PharmGKB). Query gene-drug interactions, CPIC guidelines, allele functions, for precision medicine and genotype-guided dosing decisions.
Query NCBI ClinVar for variant clinical significance. Search by gene/position, interpret pathogenicity classifications, access via E-utilities API or FTP, annotate VCFs, for genomic medicine.
Access COSMIC cancer mutation database. Query somatic mutations, Cancer Gene Census, mutational signatures, gene fusions, for cancer research and precision oncology. Requires authentication.
Query Ensembl genome database REST API for 250+ species. Gene lookups, sequence retrieval, variant analysis, comparative genomics, orthologs, VEP predictions, for genomic research.
Query openFDA API for drugs, devices, adverse events, recalls, regulatory submissions (510k, PMA), substance identification (UNII), for FDA regulatory data analysis and safety research.
Query NCBI Gene via E-utilities/Datasets API. Search by symbol/ID, retrieve gene info (RefSeqs, GO, locations, phenotypes), batch lookups, for gene annotation and functional analysis.
Take jeffallan/postgres-pro from the repository into ~/.claude/skills for personal
use, or into .claude/skills inside a project.
The agent identifies a skill by the name field in its header. Two skills with the
same name cannot sit side by side — one of them will be ignored.