Use when fine-tuning LLMs, training custom models, or adapting foundation models for specific tasks. Invoke for configuring LoRA/QLoRA adapters, preparing JSONL training datasets, setting hyperparameters for fine-tuning runs, adapter training, transfer learning, finetuning with Hugging Face PEFT, OpenAI fine-tuning, instruction tuning, RLHF, DPO, or quantizing and deploying fine-tuned models. Trigger terms include: LoRA, QLoRA, PEFT, finetuning, fine-tuning, adapter tuning, LLM training, model training, custom model.
npx skills add https://github.com/Jeffallan/claude-skills --skill fine-tuning-expert
Senior ML engineer specializing in LLM fine-tuning, parameter-efficient methods, and production model optimization.
python validate_dataset.py --input data.jsonl — fix all errors before proceedingLoad detailed guidance based on context:
| Topic | Reference | Load When |
|-------|-----------|-----------|
| LoRA/PEFT | references/lora-peft.md | Parameter-efficient fine-tuning, adapters |
| Dataset Prep | references/dataset-preparation.md | Training data formatting, quality checks |
| Hyperparameters | references/hyperparameter-tuning.md | Learning rates, batch sizes, schedulers |
| Evaluation | references/evaluation-metrics.md | Benchmarking, metrics, model comparison |
| Deployment | references/deployment-optimization.md | Model merging, quantization, serving |
from datasets import load_dataset
from transformers import AutoTokenizer, AutoModelForCausalLM, TrainingArguments
from peft import LoraConfig, get_peft_model, TaskType
from trl import SFTTrainer
import torch
# 1. Load base model and tokenizer
model_id = "meta-llama/Llama-3-8B"
tokenizer = AutoTokenizer.from_pretrained(model_id)
tokenizer.pad_token = tokenizer.eos_token
model = AutoModelForCausalLM.from_pretrained(
model_id,
torch_dtype=torch.bfloat16,
device_map="auto",
)
# 2. Configure LoRA adapter
lora_config = LoraConfig(
task_type=TaskType.CAUSAL_LM,
r=16, # rank — increase for more capacity, decrease to save memory
lora_alpha=32, # scaling factor; typically 2× rank
target_modules=["q_proj", "v_proj"],
lora_dropout=0.05,
bias="none",
)
model = get_peft_model(model, lora_config)
model.print_trainable_parameters() # verify: should be ~0.1–1% of total params
# 3. Load and format dataset (Alpaca-style JSONL)
dataset = load_dataset("json", data_files={"train": "train.jsonl", "test": "test.jsonl"})
def format_prompt(example):
return {"text": f"### Instruction:\n{example['instruction']}\n\n### Response:\n{example['output']}"}
dataset = dataset.map(format_prompt)
# 4. Training arguments
training_args = TrainingArguments(
output_dir="./checkpoints",
num_train_epochs=3,
per_device_train_batch_size=4,
gradient_accumulation_steps=4, # effective batch size = 16
learning_rate=2e-4,
lr_scheduler_type="cosine",
warmup_ratio=0.03, # always use warmup
fp16=False,
bf16=True,
logging_steps=10,
eval_strategy="steps",
eval_steps=100,
save_steps=200,
load_best_model_at_end=True,
)
# 5. Train
trainer = SFTTrainer(
model=model,
args=training_args,
train_dataset=dataset["train"],
eval_dataset=dataset["test"],
dataset_text_field="text",
max_seq_length=2048,
)
trainer.train()
# 6. Save adapter weights only
model.save_pretrained("./lora-adapter")
tokenizer.save_pretrained("./lora-adapter")
QLoRA variant — add these lines before loading the model to enable 4-bit quantization:
from transformers import BitsAndBytesConfig
bnb_config = BitsAndBytesConfig(
load_in_4bit=True,
bnb_4bit_quant_type="nf4",
bnb_4bit_compute_dtype=torch.bfloat16,
bnb_4bit_use_double_quant=True,
)
model = AutoModelForCausalLM.from_pretrained(model_id, quantization_config=bnb_config, device_map="auto")
Merge adapter into base model for deployment:
from peft import PeftModel
base = AutoModelForCausalLM.from_pretrained(model_id, torch_dtype=torch.bfloat16)
merged = PeftModel.from_pretrained(base, "./lora-adapter").merge_and_unload()
merged.save_pretrained("./merged-model")
When implementing fine-tuning, always provide:
TrainingArguments + LoraConfig block, commented)Create new skills, modify and improve existing skills, and measure skill performance. Use when users want to create a skill from scratch, edit, or optimize an existing skill, run evals to test a skill, benchmark skill performance with variance analysis, or optimize a skill's description for better triggering accuracy.
Access NCBI GEO for gene expression/genomics data. Search/download microarray and RNA-seq datasets (GSE, GSM, GPL), retrieve SOFT/Matrix files, for transcriptomics and expression analysis.
Bayesian modeling with PyMC. Build hierarchical models, MCMC (NUTS), variational inference, LOO/WAIC comparison, posterior checks, for probabilistic programming and inference.
Multi-objective optimization framework. NSGA-II, NSGA-III, MOEA/D, Pareto fronts, constraint handling, benchmarks (ZDT, DTLZ), for engineering design and optimization problems.
Statistical modeling toolkit. OLS, GLM, logistic, ARIMA, time series, hypothesis tests, diagnostics, AIC/BIC, for rigorous statistical inference and econometric analysis.
Add unsigned integer (uint) type support to PyTorch operators by updating AT_DISPATCH macros. Use when adding support for uint16, uint32, uint64 types to operators, kernels, or when user mentions enabling unsigned types, barebones unsigned types, or uint support.
Convert PyTorch AT_DISPATCH macros to AT_DISPATCH_V2 format in ATen C++ code. Use when porting AT_DISPATCH_ALL_TYPES_AND*, AT_DISPATCH_FLOATING_TYPES*, or other dispatch macros to the new v2 API. For ATen kernel files, CUDA kernels, and native operator implementations.
Write docstrings for PyTorch functions and methods following PyTorch conventions. Use when writing or updating docstrings in PyTorch code.
Take jeffallan/fine-tuning-expert from the repository into ~/.claude/skills for personal
use, or into .claude/skills inside a project.
The agent identifies a skill by the name field in its header. Two skills with the
same name cannot sit side by side — one of them will be ignored.