Expert system for generating, validating, and optimizing ClickHouse SQL. Use this when the user needs data, queries, or analysis.
npx skills add https://github.com/FrankChen021/datastoria --skill sql-expert
> ## 🚨 CRITICAL RULE: MANDATORY VALIDATION
> You MUST call validate_sql(sql) for every new query you generate.
> Context Note: Historical validation steps are pruned to save tokens, but this does NOT excuse you from validating new queries in the current turn. Always validate before executing.
get_tables and explore_schema first.columns argument of explore_schema instead of loading the full table schema.ProfileEvent_*, CurrentMetric_*, and flattened event columns on system.* tables.explore_schema with a narrower columns list based on the user-mentioned identifier or the closest confirmed column names.explore_schema. Do not assume standard columns exist if they are not in the tool output.WHERE user = '<clickHouseUser>'.system.* tables (e.g., system.query_log, system.parts, system.merges), defer to the clickhouse-system-queries skill - it contains table-specific patterns, predicates, and resource metrics that this skill does not cover. For system.query_log, do not generate SQL until references/system-query-log.md has been loaded via skill_resource, and do not call search_query_log for chart/time-series requests.database.table).;).LIMIT for data exploration queries.event_date or timestamp) first. Use bounded time windows (e.g., last 24h, 7 days) unless the user asks for all history.WHERE event_time > now() - 1h (If PK is event_date, event_time, this scans everything).WHERE event_date >= toDate(now() - 1h) AND event_time > now() - 1h (Uses index, handles midnight crossover).uniq() instead of uniqExact() unless precision is explicitly requested.GLOBAL IN only for distributed queries.validate_sql(sql).execute_sql(sql).Efficient database search tool for bioRxiv preprint server. Use this skill when searching for life sciences preprints by keywords, authors, date ranges, or categories, retrieving paper metadata, downloading PDFs, or conducting literature reviews.
Access BRENDA enzyme database via SOAP API. Retrieve kinetic parameters (Km, kcat), reaction equations, organism data, and substrate-specific enzyme information for biochemical research and metabolic pathway analysis.
Access ClinPGx pharmacogenomics data (successor to PharmGKB). Query gene-drug interactions, CPIC guidelines, allele functions, for precision medicine and genotype-guided dosing decisions.
Query NCBI ClinVar for variant clinical significance. Search by gene/position, interpret pathogenicity classifications, access via E-utilities API or FTP, annotate VCFs, for genomic medicine.
Access COSMIC cancer mutation database. Query somatic mutations, Cancer Gene Census, mutational signatures, gene fusions, for cancer research and precision oncology. Requires authentication.
Query Ensembl genome database REST API for 250+ species. Gene lookups, sequence retrieval, variant analysis, comparative genomics, orthologs, VEP predictions, for genomic research.
Query openFDA API for drugs, devices, adverse events, recalls, regulatory submissions (510k, PMA), substance identification (UNII), for FDA regulatory data analysis and safety research.
Query NCBI Gene via E-utilities/Datasets API. Search by symbol/ID, retrieve gene info (RefSeqs, GO, locations, phenotypes), batch lookups, for gene annotation and functional analysis.
Take frankchen021/sql-expert from the repository into ~/.claude/skills for personal
use, or into .claude/skills inside a project.
The agent identifies a skill by the name field in its header. Two skills with the
same name cannot sit side by side — one of them will be ignored.