Builds or updates the code knowledge graph via tree-sitter AST and SQLite. Use when setting up the graph before search or blast-radius analysis.
npx skills add https://github.com/athola/claude-night-market --skill graph-build
Build or update the .gauntlet/graph.db knowledge graph
for the current codebase.
or a user-specified path.
.gauntlet/graph.dbexists, run an incremental update. Otherwise, run a
full build.
For full build:
python3 ${CLAUDE_PLUGIN_ROOT}/scripts/graph_build.py <dir>
For incremental update:
python3 ${CLAUDE_PLUGIN_ROOT}/scripts/graph_build.py <dir> --incremental
files parsed, nodes created, edges created, and
duration.
or running blast radius analysis.
gauntlet:graph-search)gauntlet:extract)The graph extracts nodes (File, Class, Function, Type,
Test) and edges (CALLS, IMPORTS_FROM, INHERITS, CONTAINS,
IMPLEMENTS, TESTED_BY) from 20+ languages including
Python, JavaScript, TypeScript, Go, Rust, Java, C/C++,
Ruby, and PHP.
.gauntlet/graph.db (SQLite with WAL mode).gauntlet/.gitignore to prevent commitsunchanged files
.gauntlet/graph.db exists and is a valid SQLite file afterthe skill completes; .gauntlet/.gitignore exists to prevent
the database from being committed
files_parsed,nodes_created, edges_created, duration; values are
non-zero for non-empty codebases
.gauntlet/graph.db alreadyexists (script invoked with --incremental); full build only
on first run
or run blast-radius analysis
Efficient database search tool for bioRxiv preprint server. Use this skill when searching for life sciences preprints by keywords, authors, date ranges, or categories, retrieving paper metadata, downloading PDFs, or conducting literature reviews.
Access BRENDA enzyme database via SOAP API. Retrieve kinetic parameters (Km, kcat), reaction equations, organism data, and substrate-specific enzyme information for biochemical research and metabolic pathway analysis.
Access ClinPGx pharmacogenomics data (successor to PharmGKB). Query gene-drug interactions, CPIC guidelines, allele functions, for precision medicine and genotype-guided dosing decisions.
Query NCBI ClinVar for variant clinical significance. Search by gene/position, interpret pathogenicity classifications, access via E-utilities API or FTP, annotate VCFs, for genomic medicine.
Access COSMIC cancer mutation database. Query somatic mutations, Cancer Gene Census, mutational signatures, gene fusions, for cancer research and precision oncology. Requires authentication.
Query Ensembl genome database REST API for 250+ species. Gene lookups, sequence retrieval, variant analysis, comparative genomics, orthologs, VEP predictions, for genomic research.
Query openFDA API for drugs, devices, adverse events, recalls, regulatory submissions (510k, PMA), substance identification (UNII), for FDA regulatory data analysis and safety research.
Query NCBI Gene via E-utilities/Datasets API. Search by symbol/ID, retrieve gene info (RefSeqs, GO, locations, phenotypes), batch lookups, for gene annotation and functional analysis.
Take athola/graph-build from the repository into ~/.claude/skills for personal
use, or into .claude/skills inside a project.
The agent identifies a skill by the name field in its header. Two skills with the
same name cannot sit side by side — one of them will be ignored.