Manages digital garden notes, link structures, and health metrics. Use when curating a knowledge base, pruning stale notes, or tracking content maturity.
npx skills add https://github.com/athola/claude-night-market --skill digital-garden-cultivator
Design, manage, and evolve digital gardens as living knowledge bases. Digital gardens are interconnected note collections that grow organically, emphasizing evolution over perfection.
A digital garden approach to knowledge management that:
python scripts/garden_metrics.py path/to/garden.json --format brief
Verification: Run python --version to verify Python environment.
json - Full metrics as JSONbrief - One-line summaryprometheus - Prometheus exposition formatstructures - use memory-palace-architect
structures - use memory-palace-architect
| Level | Status | Description |
|-------|--------|-------------|
| Seedling | New/rough | Early ideas, incomplete thoughts |
| Growing | Developing | Being actively refined |
| Evergreen | Mature | Stable, well-developed content |
garden:
sections: ["research", "patterns", "experiments"]
plots:
- name: "My First Note"
purpose: "reference" # reference | evergreen | lab
maturity: "seedling" # seedling | growing | evergreen
inbound_links: []
outbound_links: []
last_tended: "2025-11-24T10:00:00Z"
Verification: Run the command with --help flag to verify availability.
| Action | Frequency | Purpose |
|--------|-----------|---------|
| Quick prune | Every 2 days | Remove dead links, fix typos |
| Stale review | After 7 days inactive | Assess content freshness |
| Archive | After 30 days inactive | Move to archive or delete |
modules/linking-patterns.mdmodules/maintenance.mdmodules/maintenance.mdmemory-palace-architect - Host garden within palace structureknowledge-locator - Search garden contentsession-palace-builder - Seed garden from session insightsPre-commit hooks failing
Run SKIP=... git commit to bypass temporarily, then fix issues
Merge conflicts
Use git merge --abort to reset, then resolve conflicts carefully
Commit rejected
Check hook output and fix reported issues before committing again
scripts/garden_metrics.py runs without error on the targetgarden.json and outputs link density, bidirectional coverage,
freshness, and maturity ratio
surfaced for the user's review
seedling, growing, or evergreen
or reconnected during the maintenance pass
garden.json is absent or malformed, the error is reportedwith the path that was searched rather than silently completing
Phylogenetic tree toolkit (ETE). Tree manipulation (Newick/NHX), evolutionary event detection, orthology/paralogy, NCBI taxonomy, visualization (PDF/SVG), for phylogenomics.
Foundational plotting library. Create line plots, scatter, bar, histograms, heatmaps, 3D, subplots, export PNG/PDF/SVG, for scientific visualization and publication figures.
Create publication figures with matplotlib/seaborn/plotly. Multi-panel layouts, error bars, significance markers, colorblind-safe, export PDF/EPS/TIFF, for journal-ready scientific plots.
Phylogenetic tree toolkit (ETE). Tree manipulation (Newick/NHX), evolutionary event detection, orthology/paralogy, NCBI taxonomy, visualization (PDF/SVG), for phylogenomics.
Create institutional-quality equity research initiation reports through a 5-task workflow. Tasks must be executed individually with verified prerequisites - (1) company research, (2) financial modeling, (3) valuation analysis, (4) chart generation, (5) final report assembly. Each task produces specific deliverables (markdown docs, Excel models, charts, or DOCX reports). Tasks 3-5 have dependencies on earlier tasks.
Low-level plotting library for full customization. Use when you need fine-grained control over every plot element, creating novel plot types, or integrating with specific scientific workflows. Export to PNG/PDF/SVG for publication. For quick statistical plots use seaborn; for interactive plots use plotly; for publication-ready multi-panel figures with journal styling, use scientific-visualization.
Low-level plotting library for full customization. Use when you need fine-grained control over every plot element, creating novel plot types, or integrating with specific scientific workflows. Export to PNG/PDF/SVG for publication. For quick statistical plots use seaborn; for interactive plots use plotly; for publication-ready multi-panel figures with journal styling, use scientific-visualization.
Delegate complex, long-running tasks to Manus AI agent for autonomous execution. Use when user says 'use manus', 'delegate to manus', 'send to manus', 'have manus do', 'ask manus', 'check manus sessions', or when tasks require deep web research, market analysis, product comparisons, stock analysis, competitive research, document generation, data analysis, or multi-step workflows that benefit from autonomous agent execution with parallel processing.
Take athola/digital-garden-cultivator from the repository into ~/.claude/skills for personal
use, or into .claude/skills inside a project.
The agent identifies a skill by the name field in its header. Two skills with the
same name cannot sit side by side — one of them will be ignored.