DeepDNA MCP Server

by deepdna Your server? Claim it

answering

DeepDNA is answering right now. Last checked 10 min ago. It exposes 5 tools.

Pharmacogenomics for AI agents: cited drug–gene, gene and rsID lookups plus a medication screen.

Uptime history 30 days of history

30 days agonow

100.0%

Uptime 24h

91 of 91 checks

Tools

read from the server

329 ms

Response time

average over 24h

open, no key

Access

streamable-http

What changed 14

Every tool that appeared, vanished or quietly changed what it asks for. Recorded since 11 October 2026. No other catalogue keeps this.

25 Oct 2 tool descriptions were rewritten check_medications, lookup_variant

24 Oct a tool disappeared request_beta_access

24 Oct a tool changed version

17 Oct a tool changed version

17 Oct a tool description was rewritten lookup_variant

17 Oct a tool changed the parameters it asks for lookup_variant

11 Oct 2 tools appeared check_medications, request_beta_access

11 Oct 2 tool descriptions were rewritten lookup_drug_gene, lookup_variant

11 Oct a tool changed version2 times that day

11 Oct a tool changed the parameters it asks for lookup_variant

and 1 more, back to 11 October 2026

Tools have disappeared from this server

A tool that vanishes takes a piece of your agent with it, and the change arrives silently. Watch this server and every such change lands in your inbox.

Connect this server

Endpoint below is the one we actually reach during checks — not the one copied from a README. Last verified 10 min ago.

Claude Code Claude Desktop Codex Cursor VS Code

run in your terminal

claude mcp add knowledge --transport http https://deepdna.ai/mcp

Settings → Connectors → Add custom connector, then paste this address

https://deepdna.ai/mcp

~/.codex/config.toml

[mcp_servers.knowledge]
url = "https://deepdna.ai/mcp"

.cursor/mcp.json

{
  "mcpServers": {
    "knowledge": {
      "url": "https://deepdna.ai/mcp"
    }
  }
}

.vscode/mcp.json

{
  "servers": {
    "knowledge": {
      "type": "http",
      "url": "https://deepdna.ai/mcp"
    }
  }
}

Available tools 5

Read directly from the server with tools/list, grouped by what they act on. If a tool disappears, we record the date.

lookup

lookup_drug_gene

Pharmacogenomic guidance for a gene, optionally for one drug: guideline (CPIC or DPWG, "drug label", or null when the record rests on the primary literature), summary of the recommendation, phenotypes and sources. Omit drug to list every drug curated for that gene.

lookup_gene

Everything curated about one gene: function, key variants with rsIDs, metabolizer or function phenotypes, drug interactions, what a consumer genotyping array can and cannot tell you, and sources.

lookup_variant

One variant by dbSNP rsID: gene, star-allele or common name, alleles, functional effect, population frequency and sources. Send the rsID only, never the user's genotype. A single variant is not a phenotype or metabolizer status.

genes

list_genes

List the genes in the DeepDNA knowledge base, with a one-line summary and category for each.

medications

check_medications

Given a list of generic drug names, say which ones have a curated drug–gene record, with which genes and what each record rests on (a CPIC or DPWG guideline, a drug label, or the primary literature), and which are not covered. Needs no genotype.

Tools removed

Tools this server used to expose. Anything built against them stopped working on the day they went.

request_beta_access

removed 24 Oct 2026

Endpoints

URL	Transport	State	Latency	Checked
https://deepdna.ai/mcp	streamable-http	answering	703 ms	10 min ago

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DeepDNA — questions

Answers built from our own checks of this server.

What can DeepDNA do?

It exposes 5 tools, read directly from the server on our last check. Among them: check_medications, list_genes, lookup_drug_gene, lookup_gene, lookup_variant. The full list with descriptions is on this page — we take it from the server itself via tools/list, not from a README. How MCP servers expose tools in the first place →

Is DeepDNA working right now?

We send a real MCP handshake every 15 minutes. Over the last 24 hours 91 of 91 checks got a reply (100.0%), average response time 329 ms. The bar chart above shows every period we have measured.

Did DeepDNA ever remove tools?

Yes. request_beta_access is no longer exposed — we recorded the date each one disappeared. A tool vanishing usually means a breaking change for anything that depended on it.

How do I connect DeepDNA?

Copy the ready config from this page. We generate it for Claude Code, Claude Desktop, Codex, Cursor and VS Code, each in the form that client actually reads. It is a remote server, so there is nothing to install — the client connects to the address.

Does DeepDNA need an API key?

No. DeepDNA completed a full MCP handshake with us as an anonymous client and listed its tools without asking for anything. All 5 of them are readable on this page. This is what we observed, not what the docs claim.

How fast is DeepDNA?

It answers our handshake in 329 ms on average, which is faster than 49% of all working MCP servers we measure. The comparison comes from our own checks across the whole registry, every 15 minutes.