biotender-max/scgpt
> Embed and annotate single-cell expression data with scGPT, a foundation model (1) Producing cell embeddings from an AnnData for clustering/integration, (2) Zero-shot or fine-tuned cell-type annotation, (3) Gene-level representation for perturbation/GRN tasks. For probabilistic single-cell models (scVI etc.), use the scvi-tools library.
npx skills add https://github.com/BioTender-max/awesome-bio-agent-skills --skill scgptTake biotender-max/scgpt from the repository into ~/.claude/skills for personal
use, or into .claude/skills inside a project.
The agent identifies a skill by the name field in its header. Two skills with the
same name cannot sit side by side — one of them will be ignored.