Qsiprep Tool

biotender-max/qsiprep-tool

Use this skill whenever the user wants to run QSIPrep (BIDS App) for diffusion MRI (DWI) preprocessing with best-practice workflows (topup/eddy, denoising/unringing options, susceptibility/motion correction, coregistration/normalization, QC reports) on BIDS datasets. This skill is the NeuroClaw interface-layer wrapper for QSIPrep: it checks installation (Docker/Singularity/conda), generates an execution plan with exact commands and resource estimates, waits for explicit confirmation, then routes all execution through claw-shell.

3k tokens

context cost

the whole folder, loaded on every use

files

instructions only

copies elsewhere

how many repositories repackaged it

132

stars on the repo

on the repository, not the skill itself

Install

one command, takes just this skill from the repository

npx skills add https://github.com/BioTender-max/awesome-bio-agent-skills --skill qsiprep-tool

How to use it

Copy the folder

Take biotender-max/qsiprep-tool from the repository into ~/.claude/skills for personal use, or into .claude/skills inside a project.

Check the name does not clash

The agent identifies a skill by the name field in its header. Two skills with the same name cannot sit side by side — one of them will be ignored.

Install what it needs

The instructions reference docker. Without those the skill loads but fails at the first command.