Gene Panel Selection Workflow

biotender-max/gene panel selection workflow

| dataset understanding + smart downsampling + train/test splits, algorithmic selection (HVG/DE/RF/scGeneFit/SpaPROS), optimal sub-panel discovery (ARI vs size), biological completion with a stability gate (Completion Rule), consensus scoring and completion (only if there is still room), and benchmarking on test splits (ARI/NMI/Silhouette + UMAP similarity).

7k tokens

context cost

the whole folder, loaded on every use

files

instructions only

copies elsewhere

how many repositories repackaged it

132

stars on the repo

on the repository, not the skill itself

Install

one command, takes just this skill from the repository

npx skills add https://github.com/BioTender-max/awesome-bio-agent-skills --skill Gene Panel Selection Workflow

How to use it

Copy the folder

Take biotender-max/gene panel selection workflow from the repository into ~/.claude/skills for personal use, or into .claude/skills inside a project.

Check the name does not clash

The agent identifies a skill by the name field in its header. Two skills with the same name cannot sit side by side — one of them will be ignored.