mcpbeat

Alterlab Etetoolkit

alterlab-ieu/alterlab-etetoolkit

Manipulate, annotate, and render phylogenetic trees programmatically with the ETE Toolkit (ete3) — parse and edit Newick/NHX, detect duplication/speciation events, infer orthology and paralogy, query NCBI taxonomy, and export PDF/SVG figures. Use when traversing or reformatting tree files, doing phylogenomic comparative analysis, or producing publication tree graphics in Python. Part of the AlterLab Academic Skills suite.

21k tokens
context cost
the whole folder, loaded on every use
10
files
ships runnable scripts
0
copies elsewhere
how many repositories repackaged it
56
stars on the repo
on the repository, not the skill itself

Install

one command, takes just this skill from the repository 
npx skills add https://github.com/AlterLab-IEU/AlterLab-Academic-Skills --skill alterlab-etetoolkit

How to use it

Copy the folder

Take alterlab-ieu/alterlab-etetoolkit from the repository into ~/.claude/skills for personal use, or into .claude/skills inside a project.

Check the name does not clash

The agent identifies a skill by the name field in its header. Two skills with the same name cannot sit side by side — one of them will be ignored.